Mehmeti M, Bergenfelz C, Källberg E, Millrud C, Björk P, Ivars F, Johansson-Lindbom B, Kjellström S, André I, Leandersson K. Wnt5a is a TLR2/4-ligand that induces tolerance in human myeloid cells. Commun Biol. 2019 May 9;2:176. 

Lizatović R, Assent M, Barendregt A, Dahlin J, Bille A, Satzinger K, Tupina D, Heck AJR, Wennmalm S, André I. A Protein-Based Encapsulation System with Calcium-Controlled Cargo Loading and Detachment. Angew Chem Int Ed Engl. 2018 Aug 27;57(35):11334-11338. [LINK]

 Potrzebowski W, Trewhella J, André I. Bayesian inference of protein conformational ensembles from limited structural data. PLoS Computational Biology. 2018. 14, 12, e1006641.
 

André I, Belic S. Computational assessment of folding energy landscapes in heterodimeric coiled coils. Proteins. 2018. July 86(7):790-801.
 

André I. Modeling the Structure of Helical Assemblies with Experimental Constraints in Rosetta. Methods Mol Biol. 2018;1764:475-489.

Regenthal P, Hansen JS, André I, Lindkvist-Petersson K. Thermal stability and structural changes in bacterial toxins responsible for food poisoning. PLoS One. 2017 Feb 16;12(2):e0172445.​

Boelt SG, Norn C, Rasmussen MI, André I, Čiplys E, Slibinskas R, Houen G, Højrup P. Mapping the Ca(2+) induced structural change in calreticulin. J Proteomics. 2016 Jun 16;142:138-48.

Lizatović R, Aurelius O, Stenstrom O, Drakenberg T, Akke M, Logan DT and André I. A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch. Structure 2016; doi: 10.1016/j.str.2016.03.027.

Norn CN and André I. Computational design of protein self-assembly. Current Opinion in Structural Biology 2016; pp 39-45. doi:10.1016/j.sbi.2016.04.002.
 

Potrzebowski W, André I. "Automated determination of fibrillar structures by simultaneous model building and fiber diffraction refinement". Nat Methods. 2015; doi: 10.1038/nmeth.3399

Rämisch S, Lizatović R, André I. Automated de novo phasing and model building of coiled-coil proteins. Acta Cryst D. 2015;D71. 

Kaltofen S, Li C, Huang PS, Serpell LC, Barth A, André I. Computational de novo design of a self-assembling Peptide with predefined structure. Journal of molecular biology. 2015;427:550-62.

Rämisch S, Weiniger U, Martinsson J, Akke M and Andre I "Computational design of Leucine-Rich Repeat proteins with a defined geometry" Proc Natl Acad Sci, 2014, pii: 201413638.

Rämisch S, Lizatovic and Andre I. "Exploring alternate states and oligomerization preferences of coiled-coils by de novo structure modeling" Proteins, 2014. doi: 10.1002/prot.24729
 

André I, Corn J. "The RosettaCon 2012 Special Collection: Code Writ on Water, Documentation Writ in Stone." PLoS One. 2013 Sep 26;8(9):e73775. doi: 10.1371/journal.pone.0073775.

King NP, Sheffler W, Sawaya MR, Vollmar BS, Sumida JP, André I, Gonen T, Yeates TO, Baker D. "Computational design of self-assembling protein nanomaterials with atomic level accuracy". (2012) Science. Jun 1;336(6085):1171-4.
 

Meisner J, Maehigashi T, Andre I, Dunham CM and Moran, Jr CP. “Structure of the Basal Components of a Novel Bacterial Transporter”. (2012) Proc Natl Acad Sci U S A. Apr 3;109(14):5446-51.
  

Elkin M, Andre I and Lukatsky, D. Energy Fluctuations Shape Free Energy of Nonspecific Biomolecular Interactions. Journal of Statistical Physics (2012), 10.1007/s10955-012-0421-1.

Dimaio F, Leaver-Fay A, Bradley P, Baker D, André I. Modeling Symmetric Macromolecular Structures in Rosetta3. PLoS One. 2011;6(6):e20450.